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View Structure Prediction Details

Protein: CE34337
Organism: Caenorhabditis elegans
Length: 451 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34337.

Description E-value Query
Range
Subject
Range
CE07369 - status:Partially_confirmed UniProt:Q21407 protein_id:AAB53873.1
470.0 [0..1] [440..1]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHRKLAAFF SCFASRRFSF SLYSLYILFC AGAFPIPRSP SSFFLTISFS SSILPFSSIQ  60
   61 KNYWLVTEKK NQKKKAFGGS EQNEANPPKL LVYMDQDYKA HFKVFCSEVR EWEKIHVVGS 120
  121 LPVLGEWNPR KSFPLTKSTD EENTFHAIVS VPSSIKEFNF RYIRVMYLDP SENNTSEPIM 180
  181 VLSKWETFNN ARTCLIGVES QDGVAR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.69897
Match: 1a47A
Description: CGTASE FROM THERMOANAEROBACTERIUM THERMOSULFURIGENES EM1 IN COMPLEX WITH A MALTOHEXAOSE INHIBITOR
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [207-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNITDQFGSY SGKTQITDGW ILNEKESVVY FRIHGEALKF FAKSYANKEY RLKVEPFDVR  60
   61 YSEIDGDDVV NLPTPSLPCF SNTDLSVLTR EDPIFGDQYF NGSVFRNDQD YLVFRTRTVS 120
  121 LQNLAFRIEF YHGEKRCALS YVLPSSMSGT HGATVSPVIG LSSAPVGHIN VNYMIVKRNK 180
  181 YTDQNL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [393-451]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIDSMKTTFG RYWRKRNRML QIGHRGMGSS YTKFVESAGD PFLNLNSETL AKERTLYFP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 2oogA
Description: No description for 2oogA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle