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View Structure Prediction Details

Protein: mek-1
Organism: Caenorhabditis elegans
Length: 300 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mek-1.

Description E-value Query
Range
Subject
Range
gi|50748742 - gi|50748742|ref|XP_421385.1| PREDICTED: similar to MAP/microtubule affinity-regulating kinase 3 long...
278.0 [0..12] [300..52]

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Predicted Domain #1
Region A:
Residues: [1-300]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERDFDLGMG RPGGLGGLGG EPIMQQMPQP APHHPSRSSN DHNVKNLMKQ AEENSGYLTL  60
   61 QGNRRKADLK ELQFVEDIGH GSCGTVTKCR YKSVIMAVKT MPRTSNSYEM SRILMDLDVI 120
  121 CLSFDCPYIV RCFGYFITNF DVRVCMECMA TCLDRLLIRI KQPIPERIIG KLSVSIIKAL 180
  181 HYLKTKHQIM HRDVKPSNIL LDWSGVIKLC DFGIAGRLIE SRAHSKQAGC PLYMGPERLD 240
  241 PNNFDSYDIR SDVWSFGVTL VELATGQYPY AGTEFDMMSK ILNDEPPRLD PVCALRKKFI 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.221849
Match: 2dylA
Description: No description for 2dylA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle