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View Structure Prediction Details

Protein: CE34320
Organism: Caenorhabditis elegans
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34320.

Description E-value Query
Range
Subject
Range
RL2_CARHZ - 50S ribosomal protein L2 OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-29...
326.0 [0..22] [307..1]

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Predicted Domain #1
Region A:
Residues: [1-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISSLAVEFG ALRLACTSKI VMATRNMPAR GTKPLPRHLW DMSDLEEKTS GQYTHKPLRI  60
   61 NRLGGRDPET GRKVNQHIGG GVKFDYFMID FHRRGPADQG ATYDERILEI RRDPNRTCHI 120
  121 ALCAGINGKR WILATENMKA GDVISTSGHL SENPVIGVEG NAYPIGSLAA GTVINSIERY 180
  181 PTMDSETFVK AAGTSATIVR HQGDFTVVKL PHKHEFSLHR TCMATVGRLS HADIDGKIFG 240
  241 SAQMHRRFGY KMSSGLFHKK DGYFGRKVRA LPPVRILDTP PQAPPPNQRF TLSKKDLSGL 300
  301 HGHAKVHNLI PAGYSTRDYP E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.39794
Match: 1vsaB
Description: No description for 1vsaB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle