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View Structure Prediction Details

Protein: ced-8
Organism: Caenorhabditis elegans
Length: 458 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ced-8.

Description E-value Query
Range
Subject
Range
gi|109085649 - gi|109085649|ref|XP_001089696.1| PREDICTED: similar to XK-related protein 6 [Macaca mulatta]
486.0 [0..26] [454..111]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLKKHKSKL LLVPRDEEQE DAGIVAVLTD RIPSVLLVRW FDLFCFGFAM CSYALDFFSD  60
   61 IGIAIFHFWA GRYLSGSLVL AFALLPSVII NIISMVWMLD DEMHWKRRAH PRRTGTFELN 120
  121 QKRFIPLSKM IVLCICQMGP LF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [143-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WYYKALYYGW MFRKSSNENT DGEKRKCFSK MVEAERDATL LRFFEAFLES APQLIIQGSI  60
   61 AASYFQNYYQ TGTYPYWLYF QAASLLLSII SISWSVVVQN RSLRMIRDDK VNIWPHEAVL 120
  121 QFCWRFLTIL ARIITLVALV LIFGINVVPL ISVHLLVTLV HVIFLQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [309-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AIHIDACTHI EKLLLLINTF IHIFIPFNMV EGNTRWRYLT AYSVEFIEMM LVCWLLPLSL  60
   61 NTFPYIEKVQ VGVPISFIAG IAIMMMYYQF FHPNRRQLIV TQSQEDLSLN VQKSVETLTP 120
  121 KLESSLEISG EQNTSQDLVS ELLLDVEHEN 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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