| Protein: | kvs-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 490 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kvs-1.
| Description | E-value | Query Range |
Subject Range |
|
|
322.0 | [0..42] | [490..6] |
|
Region A: Residues: [1-490] |
1 11 21 31 41 51
| | | | | |
1 MSTERLMYLD LNKGNQIAMV IPSTRKGHAA SRDNFGNSNH HGDEIVHRLN NGRRSEIDEV 60
61 KPDLVSGAGD TVIKLNVGGT SFRIRISSIF ARSADEKLSA FAQLNHEQRL QACDAFLMPQ 120
121 EEYYLERSAV LFDSIFKYYI SGQLHRPLDV CPTEFATELA YWKINDGLMS NCCWRGYNMS 180
181 PSLEELVAPK EKKIELHDRS MRSRIHQFCE GDGSLFSTLF TFGSITFVLI SVIGLVLGSI 240
241 HEFQVPIYKK GGKSERISNW SIVENENIIW EPHPIFGYVE TVCIIWFTVE FIVRLAVTPN 300
301 RFQFLVGIMN IVDMIAIIPF YLELGLALFG IDVASLSDIK GALLVVRVLR VLRVVRILKL 360
361 GRYSSGMRTF ALTLKSSARQ LGMMGMVLST GVVFFSTLLY FVEKDEKDTP FTSIPAAFWW 420
421 AIVTMTTVGY GDYVPVTVPG KLIASGAIIS GVLVLALPIT IIVDNFMKVS GNVNANIFSS 480
481 ANQRPIDVAE
|
| Detection Method: |  |
| Confidence: | 75.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
