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View Structure Prediction Details

Protein: hst-2
Organism: Caenorhabditis elegans
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hst-2.

Description E-value Query
Range
Subject
Range
HS2ST_CHICK - Heparan sulfate 2-O-sulfotransferase 1 OS=Gallus gallus GN=HS2ST1 PE=1 SV=1
269.0 [0..30] [323..62]

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Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWKKRKVLY FAGISVFILI LLLLKLNSKP KANVWPTSSK IVIYNRIPKT GSTTFTNAIA  60
   61 YDLYKENGFS VLHVNMTKNR QVMSLPDQYT FVNNITTWTE RLPAFYHGHV AFIDFQRFGI 120
  121 ANPIYINIIR EPLERLLSHY YFLRYGDNYR IGLKRSRAGN NETFDECYSR GGKDCDMKQM 180
  181 WIQIPYFCGH YHFCTEVGNP EALRVAKQNV LEKYLLVGTT SRMRDMIALL EVTVPDFFKG 240
  241 ALGHFDSLDA NRAHLRYTKK KIPPNDQTLS MIRRDEVYKM EREFYDFINN LFDAVFKKAT 300
  301 NGISKADDLV KLPLQYHFEK IKPS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.0
Match: 1z29A
Description: No description for 1z29A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle