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View Structure Prediction Details

Protein: CE34091
Organism: Caenorhabditis elegans
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34091.

Description E-value Query
Range
Subject
Range
gi|25487769 - pir||D84112 glycerophosphoryl diester phosphodiesterase glpQ [imported] - Bacillus halodurans (strai...
gi|10176324, gi|... - gi|15616262|ref|NP_244567.1| glycerophosphoryl diester phosphodiesterase [Bacillus halodurans C-125]...
218.0 [0..25] [317..1]

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Predicted Domain #1
Region A:
Residues: [1-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPMLIWFIV IVLIALLACL AIKFLALRIV LALLLTLPIL LSVAFCVLRR SPVQESNKAV  60
   61 FFNATSIISD RGEAHGSVHK NTIPAFRQAK QNGADTIVMD VRMTKDGMLI VLLPDSVDTD 120
  121 NATYIVDETH WIQMSQLNVY GGNNGTILTF DEAVSWCEAN KMNMIWHIPS FSSDLLTYLR 180
  181 NKIMQDSLYD KVAVTTYNLI AAGRIRCTDR QLLMGMIWKS TEYSIVNGTA VGNMYTSWYY 240
  241 SMMDTFTYWG IRSLLLPSFL GVDFLVTSVD DADRALIVES SASGMRTIIY DMETATERNY 300
  301 FANQMELPMI VNDLVSLLGT GNSSPTTPPS SSTKANKNRS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 2oogA
Description: No description for 2oogA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle