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View Structure Prediction Details

Protein: osm-7
Organism: Caenorhabditis elegans
Length: 651 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for osm-7.

Description E-value Query
Range
Subject
Range
gi|157775551 - gi|157775551|ref|XP_001665841.1| hypothetical protein CBG18238 [Caenorhabditis briggsae AF16]
gi|187025254, gi... - gi|39591759|emb|CAE71337.1| Hypothetical protein CBG18238 [Caenorhabditis briggsae], gi|187025254|em...
1034.0 [0..1] [651..1]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRSLGALS VLLLFLQLPG PSSEYELSIN HEEVTDSDRR VLLEIAKAVK RVKRNPFKRD  60
   61 EGRSSVDSDL RQKEDNGDDN GGDEESEG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPENFQGSAN DYCDKFEQHF SYFCVGETDQ TDKNAYVIKK FCPSYKTACK HKAVTTSVSL  60
   61 TSWPTDPFAK EITVASRPLP STSGRTSHSR RRDSDEDSDS AEDEEVYYAE LRKRYPCKPD 120
  121 CDKRIFAHCT EECKCDYIYP VVQRFCNPPP MPMFLNTCRL WYHGCPKYER YHYASQFVYS 180
  181 KAEK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [273-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKVLPGSPDQ ASVNPYGLPQ PAPLRNRALA LAPIRRQKRD AENEDLVVPP PVPSEIQERE  60
   61 ASLTAPESRA ILQNYRENLK SGEKKKRRSR RKKLRRRRRH RQRFSFDKDF EEITTTKRPP 120
  121 TPRELWRALK QLNSLTS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [410-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPGAVGLKSS PATLKGGGEA QGGLDGLLAS VTQPQRERDE AARQWATVDA RQLTEDIVHS  60
   61 VVTTEKDAEH KEAKKEAEPE PNFDKIKPRT FAMSSVAATT AIVDEQPEVP KKASSGRAKA 120
  121 HQGNIPILPS DATFAAQGSG DDTFRAFDGL SDSRGLVHTP RSRSPFTKPG LWEPNPADPH 180
  181 SRDPANKYWY HPESVGVDWL NGQLQWGGHW AVPAAGAGGT AGMSAVHFPT IGSFLNIPDD 240
  241 YD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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