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View Structure Prediction Details

Protein: dgk-2
Organism: Caenorhabditis elegans
Length: 536 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dgk-2.

Description E-value Query
Range
Subject
Range
gi|114612193 - gi|114612193|ref|XP_001148677.1| PREDICTED: diacylglycerol kinase, beta isoform 5 [Pan troglodytes]
326.0 [0..39] [529..237]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMDVYDELL AAALFIVFSS IVLWVFRKLW AVRKRKNIND TSSKSGHYWS SINYSEQHNY  60
   61 CSGCKEHIVS GYECDNCLLK VDNINCLRAV STKIQCKVNP IHCRKETF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 2db6A
Description: No description for 2db6A was found.

Predicted Domain #2
Region A:
Residues: [109-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHHWICGNIG ADLFCEVCEE LCGGVGLQDF RCSWCWRVVH TKCKPKFTKH CDFGGLKRTI  60
   61 IPPYCVTTRR PGNRNQRMAV IDKIEIPVDI E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.69897
Match: 1xa6A
Description: Crystal Structure of the Human Beta2-Chimaerin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.28178434527408 bayes_pls_golite062009
protein binding 0.634132597449966 bayes_pls_golite062009
catalytic activity 0.564904183614451 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.509180585718177 bayes_pls_golite062009
kinase activity 0.502413328106933 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.416811228361087 bayes_pls_golite062009
transferase activity 0.255707908488426 bayes_pls_golite062009
protein kinase activity 0.197456871880971 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [200-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KWRPIMVIVN PKSGSGAGKQ LLRNFRAHLH PAQVVDVLKS NIAASLRWID EHPNVDVRIL  60
   61 IAGGDGTICS ALDQIDTLSR RIPVAVLPLG TGNDLSRLLK WGKKCDGDID VIKLMEDIQE 120
  121 AEVTLVDRWT IDAESQKKLG VRLQSNKTLS MTNYVSVGVD ACVTLGMQNT RESIPRAMSS 180
  181 RLLNKFLFFT FGTKDVFERV CKGLNERIDL YLDDVHVNLP DIEGLIFLNI PYWGAGVKPW 240
  241 ATYNDSHRQE CDDEMIEVFA VTSSFHIAQM QIGLASPLCI GQAKHAKLVF KGNHSFPMQS 300
  301 DGEAWVNSAG TVLISHKCKT AMLRKAEKQT TGCGMFF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.39794
Match: 2jgrA
Description: No description for 2jgrA was found.

Predicted functions:

Term Confidence Notes
kinase activity 1.93010589087203 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.6993468998669 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.62136531467279 bayes_pls_golite062009
transferase activity 1.1287574677626 bayes_pls_golite062009
catalytic activity 0.704900964793432 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle