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View Structure Prediction Details

Protein: tbc-13
Organism: Caenorhabditis elegans
Length: 459 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tbc-13.

Description E-value Query
Range
Subject
Range
gi|76630809 - gi|76630809|ref|XP_586580.2| PREDICTED: similar to TBC1 domain family, member 13 [Bos taurus]
242.0 [0..8] [425..350]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRYMERLA KIEEVLLIAN KKIDINELRA GCSYGVPESL RPLAWRLLLH YLPLERHKWQ  60
   61 TFLAEQRDNY DQMIEQIIVE PGTASLQQSA AQNQDNDHPL SDHPTSDWQA FFQDNKVLSQ 120
  121 IDKDVRRLYP EIQFFQLLSR FPHQHG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.93
Match: 2qfzA
Description: No description for 2qfzA was found.

Predicted Domain #2
Region A:
Residues: [147-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYPLSRRVI NHQELHSQEF GANRDGIVGC VKTNIAKQSQ DENQAPNSEF HWHQFFEYSY  60
   61 KFSQESLVFR KNCFNLMPNI LNQFIIKIVE RILFIYAKLN PGVQYVQGMN ELVAPIYYVF 120
  121 ANDADDEWAA YAEADTFFCF QQLMSEVKDN FIKKLDDSNC GIESSMSAFH NLISTFDTEL 180
  181 HKHLTLTLEI KPQFYAFRWL SLLLSQEFPL PDVITLWDAL FSDPQRFALL QYVCLAMMEL 240
  241 KREPLINGDF PFCVRLLQNY PDTDIAKIVA FAQDIRDGKA LRPIAKEISK GSKIARHARQ 300
  301 LSDTLRNLSI IKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.522879
Match: 2qfzA
Description: No description for 2qfzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle