| Protein: | twk-35 |
| Organism: | Caenorhabditis elegans |
| Length: | 572 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-35.
| Description | E-value | Query Range |
Subject Range |
|
|
269.0 | [0..1] | [565..1] |
|
Region A: Residues: [1-471] |
1 11 21 31 41 51
| | | | | |
1 MLLSHGEHRQ SFKQKRAEEK RRWSSSGSHH QPQAKQSLAV LAQLMLPALI EEHTAQQEDV 60
61 VVPTHYKADG SLSRTASNRR HVFQSVNLLQ RANGQMRKGA AGVWDIAGRA HLAGKRKVEQ 120
121 LQQKPPLWLV ILNQAYHKYG LKHAVLIIVF LIYCISGGLV FWLIEEPYQS ELRDAWQHKI 180
181 ENNRTARVDA MMKKIFNNSD YLIYIKGNTS QRLTTFFIEE LGSYENQLGV KWSQQKMDWD 240
241 FWNAVLFAGT ICTTIGYGHI YPMTDAGRML TMIFALFGIP LMLLVLQDFG KLLTITMKFP 300
301 WFQTKRLMRR IMRCCTKQPI EEMKEIERQE RHDLDIFDLP LPVGIALIVT WIFICSFVLS 360
361 VWDHNWTLLE SFYFFFTSLS TVGLGDLVPS SPRLLITMFG FILVGLSLVS MVINLLQAKM 420
421 KSTYEAGRND EKTPHIHQTL PTSLGVLQCF SPDEEKKTDY SERSLSRSTQ T
|
| Detection Method: |  |
| Confidence: | 44.30103 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [472-572] |
1 11 21 31 41 51
| | | | | |
1 SLSLPGVRQV NNTASINLRL LLLQVVLRSD GVHWVNTDTS SPTKSPDEVT NLVEYETALR 60
61 VCEQIGDNNN EEFSEAESLI CETEVLLEVG ECLSDLEEFL A
|
| Detection Method: | |
| Confidence: | 13.39794 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
