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View Structure Prediction Details

Protein: unc-18
Organism: Caenorhabditis elegans
Length: 93 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-18.

Description E-value Query
Range
Subject
Range
gi|157770600 - gi|157770600|ref|XP_001677120.1| Hypothetical protein CBG16760 [Caenorhabditis briggsae AF16]
gi|39594149, gi|... - gi|39594149|emb|CAE70259.1| Hypothetical protein CBG16760 [Caenorhabditis briggsae], gi|187026176|em...
125.0 [0..1] [93..1]

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Predicted Domain #1
Region A:
Residues: [1-93]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKQIVGHK LLNDVIRPLK KGDGRSAWNV LIVDTLAMRM LSSCCKMHNI MEEGITIVED  60
   61 LNKRREPLPT LEAIYLIAPT AESVSFNLQK SLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.221849
Match: 1epuA
Description: Neuronal Sec1, NSec1
Matching Structure (courtesy of the PDB):

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