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View Structure Prediction Details

Protein: CE33977
Organism: Caenorhabditis elegans
Length: 419 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33977.

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
236.0 [0..18] [419..2297]

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Predicted Domain #1
Region A:
Residues: [1-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARAASPQS PSKQITVVDV YDLAASIGND FEKLIDNYGN ECVRGIMPKV ISALETLEAM  60
   61 AAGNDRENEE IMRLSKAVER LEQEKHQRNQ QHLKFEEELE QVEKTYRKDI DDLQQMVKSL 120
  121 VNENRNLSTT VSSLPNHADS PVSTSMREAD LKMLLELKEM SSQQKDEIKA LQKDVDTYQC 180
  181 QVENLQNSIE KLIRQNEELL RKNASLQKQG RMIVEEKMEV VRRLEKTEES NIELKKLVKE 240
  241 TDRACKDMQL ANQDNNEPRF TLSELREVIK EKNILKGRVM ELEEELDNFK PGAKKEIMRL 300
  301 DDDDDFDRNP LQPDTSSAQS LGVDGDDLPV YGPMPKEPDE KLHPWKYERK DSGVRKFIQF 360
  361 PLLQRLWSDG VPPPRIFCKR VSSTTGSCDP TIPQLMIMAP MLLPVHIFFS AMVFMFQCL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle