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View Structure Prediction Details

Protein: CE33886
Organism: Caenorhabditis elegans
Length: 563 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33886.

Description E-value Query
Range
Subject
Range
gi|39587914, gi|... - gi|39587914|emb|CAE67933.1| Hypothetical protein CBG13533 [Caenorhabditis briggsae], gi|187028561|em...
gi|157759471 - gi|157759471|ref|XP_001672079.1| Hypothetical protein CBG13533 [Caenorhabditis briggsae AF16]
617.0 [0..1] [563..1]

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Predicted Domain #1
Region A:
Residues: [1-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFILPSESI DGTHPCNGLH MNGQDSLVQP LLTDFYQITM CYAYWKTGTH NEPAVFDVFF  60
   61 RKNPFQGEFT VFAGLEDCLR FVENFKFSQS DIDYVKKILP ENAEPEFYEY LETLNGSHLT 120
  121 IEAVAEGSVV FPKVPLLTIN GPLAMCQLIE TSILNLVNYA SLVATNAARF RQASGWKIQL 180
  181 LEFGLRRAQG PNGGLTASKY CYIGGFDATS NVLAGKLYGI PVKGTQAHSF ICSFSSPAEL 240
  241 KVRLLNHKIT NEKADLFQIS MEKRAWLLDQ FSWKAALSEV SDGELSAFVA YAIAFPDTFL 300
  301 ALIDTYDVIR SGVVNFVAVS LALHDLGYRS MGCRIDSGDL SYLSKELREC FVKVSTLKGE 360
  361 YKFFEKMSIV ASNDINEETI MSLNDQQHEI NAFGVGTHLV TCQKQPALGC VYKLVAQSAQ 420
  421 PKIKLSQDVT KITIPGKKKC YRIFGKNGYA ILDLMMLEDE PEPQPNQQIL CRHPFEVESK 480
  481 RALVNANKII KLHNVYWKDG EMITPLPTLN EIKEHVNESI RSTLRQDHRR YLNPTPYKVS 540
  541 VSERLYQFLH TLWLQNAPIG QLE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 143.0
Match: 2f7fA
Description: Crystal structure of Enterococcus faecalis putative nicotinate phosphoribosyltransferase, NEW YORK STRUCTURAL GENOMICS CONSORTIUM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nicotinate phosphoribosyltransferase activity 6.27751846600304 bayes_pls_golite062009
nicotinate-nucleotide diphosphorylase (carboxylating) activity 3.12788282156037 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 1.28938930256604 bayes_pls_golite062009
binding 0.653855264785782 bayes_pls_golite062009
catalytic activity 0.60409960326459 bayes_pls_golite062009
protein binding 0.317577842532028 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle