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View Structure Prediction Details

Protein: spp-5
Organism: Caenorhabditis elegans
Length: 103 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spp-5.

Description E-value Query
Range
Subject
Range
gi|187026179, gi... - gi|39594152|emb|CAE70262.1| Hypothetical protein CBG16766 [Caenorhabditis briggsae], gi|187026179|em...
gi|157770606 - gi|157770606|ref|XP_001677123.1| Hypothetical protein CBG16766 [Caenorhabditis briggsae AF16]
109.0 [0..1] [102..916]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLLVLAVL VAVASGLAIP ENRSALSCQM CELVVKKYEG SADKDANVIK KDFDAECKKL  60
   61 FHTIPFGTRE CDHYVNSKVD PIIHELEGGT APKDVCTKLN ECP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1qdmA
Description: (Pro)phytepsin; Plant acid proteinase, phytepsin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle