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View Structure Prediction Details

Protein: CE33780
Organism: Caenorhabditis elegans
Length: 416 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33780.

Description E-value Query
Range
Subject
Range
CE33781 - status:Confirmed UniProt:Q86D11 protein_id:CAD89740.1
401.0 [0..1] [416..1]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCHPSKADF PQDAHSVLFR PPAPIPVDVG SAIRHHLQKN PIAIVFIFGG PASQKGSIIE  60
   61 ELTSSFNFTS ISVEDIVFQY FPSRLSGSGT QIKDIQDALR NDEGMLSIDW VLEMISSRIK 120
  121 MTMNQRFVVD IVPAVSSILK AEEYRARSHD RQLNQFEMKH PISFAIDVTV KDEQALTKLN 180
  181 GEANGKDEDS KRINPELNQM MRGADDIDRG KLEKRIAEYH TCAEPFLQYF RKSSRVVSMS 240
  241 LTAEAVPNLV NTTRETLLKL GFTM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.522879
Match: 1zinA
Description: ADENYLATE KINASE WITH BOUND AP5A
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [265-416]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRKDDHIICF TTETAHDDID LTYYKLKLVN AGELGRASDN LTAQISAVYR YIASHNRHDD  60
   61 NFLVVVPSFK NQDAEKFKRI NFMEKKKEVY LDEFIKNKQH DKPPKMRTRI AVNCISSSRQ 120
  121 LFLFFEPFPT SFAQNISLLY LKQKEQSQPR DS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle