| Protein: | srw-14 |
| Organism: | Caenorhabditis elegans |
| Length: | 381 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srw-14.
| Description | E-value | Query Range |
Subject Range |
|
|
216.0 | [0..7] | [356..361] |
|
Region A: Residues: [1-381] |
1 11 21 31 41 51
| | | | | |
1 MPKSTTTTTA IPDDNYLAYD YDTDYDIYKT IYNISTKTNL YLEIATIIVN FFHLIVLLQK 60
61 EMRLCAVYIF MIGLCISDII LTSINFYNQA GELGWLPILF AGSDGISCLR EDYIEINIGM 120
121 LSMSTTSQIT CRLSLWLAIL MAVIRLLSVT FPMSQRVKNF TAAKGSVIIL IICLMFWILY 180
181 STWQFALFRV LWLPDNASEL CQVMFESSIK PRYVLATPAN LPQMLSNWGF IEFIVNFSSA 240
241 IIYPLLTISL LIALLKIKQR RQNLQRKDTE PADNTTKLIL FMTITFVLSE GLSGFNALLM 300
301 YNIEKIEENC PDFVSAIYTA ESLIAVLKTF NAFSHFFVCF FLSSQYRNVA KSLIIPKKQN 360
361 KPVELTRSTS TITVRSKTKP M
|
| Detection Method: |  |
| Confidence: | 51.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
