| Protein: | CE33750 |
| Organism: | Caenorhabditis elegans |
| Length: | 480 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33750.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..95] | [479..191] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MNPSISTAGA VVDDFQMSCR FSNFGDHAPE SFDSLSCGAC FYFIFMLVEH YKDRYVASLC 60
61 EDTFGVLVCP VDVSDKICNC YNREYVYNIP EFALNSSRIK PLNHLRLD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-176] |
1 11 21 31 41 51
| | | | | |
1 PPLPFQFDLI VKDCCSAARY CCRNTLVKYH HRVDDSPCPP TWDGWNCFDS ATPGVVFKQC 60
61 PNYIYGGS
|
| Detection Method: | |
| Confidence: | 17.09691 |
| Match: | 2qkhA |
| Description: | No description for 2qkhA was found. |
|
Region A: Residues: [177-480] |
1 11 21 31 41 51
| | | | | |
1 NIKTDYDRLS QKVCRSNGWA TPEVNAAARE HTDYTGCMSN GDVEARILAG LLTYSASVIF 60
61 LIPAVFLLTL LRPIRCQPMF ILHRHLLISC LLYGAFYLIT VSLFVVNDAP LSSQVFQNHL 120
121 FCRLLFSIQL RYLRLTNFTW MLAEAVYLWR LLHTAQHSEG ETLRSYKVIC WGVPGVITVV 180
181 YIFVRSLNDD VGMCWIENST VAWIEWMIIT PSLLAMGVNL LLLGLIVYIL VKKLRCDPHL 240
241 ERIQYRKAVR GALMLIPVFG VQQLLTIYRF RNVCLIYRLL HKSFCRRMCS EILVITSGEA 300
301 GSRS
|
| Detection Method: | |
| Confidence: | 29.30103 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
