| Protein: | cdka-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 356 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdka-1.
| Description | E-value | Query Range |
Subject Range |
|
|
593.0 | [0..1] | [354..1] |
|
Region A: Residues: [1-169] |
1 11 21 31 41 51
| | | | | |
1 MGANLTSPLP HHHRTQTTSV CNHLFSPGDG GPTFAPQRDS NTSSRSSSNA KESVLMQGWN 60
61 WSKRNIQPVM SRRSLPKSGS SSEATSSKSS DSLVSFTRNV STSTSSQYGK ISISLDRNQN 120
121 YKSVPRPSDT TTIIPNYYSL REEFRRGLQI NTRQDLVNNN LASNDLSVI
|
| Detection Method: |  |
| Confidence: | 13.853872 |
| Match: | PF03261.6 |
| Description: | No description for PF03261.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [170-356] |
1 11 21 31 41 51
| | | | | |
1 GSPKHVPRPR SVLRDDNANC DISPIAEQEN VPSEASTSEL LRGLGIFISN NCDVSDFDPA 60
61 HLVTWLRSVD RSLLLQGWQD IAFINPANLV FIFLLVRDVL PDERHLIHTL EELHAWILSC 120
121 LYVSYSYMGN EISYPLKPFL IGNDRNTFWN RCVAMVTSHS RQMLLLNSSS TFFSEVFTDL 180
181 KHCSSSE
|
| Detection Method: | |
| Confidence: | 89.522879 |
| Match: | 1ungD |
| Description: | Structural mechanism for the inhibition of CDK5-p25 by roscovitine, aloisine and indirubin. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.856796143703865 | bayes_pls_golite062009 |
| protein binding | 0.73326264902081 | bayes_pls_golite062009 |
| kinase regulator activity | 0.29156514721728 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.27414343875363 | bayes_pls_golite062009 |
| protein kinase regulator activity | 0.19903417452788 | bayes_pls_golite062009 |
