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View Structure Prediction Details

Protein: egl-13
Organism: Caenorhabditis elegans
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-13.

Description E-value Query
Range
Subject
Range
egl-13 - status:Confirmed UniProt:Q4PIT4 protein_id:AAX88814.1
213.0 [0..1] [316..107]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPMLHAGNF DSEMLLRQHE LMQHQQQQMI IANMLKATQS LPLLFNGGLN YEAILNNPVL  60
   61 NATIAGHLPN PLASNISLLQ KSISAKLAAA GNMQTVEKVE TPLNLSKDTP SPTAIPQSPL 120
  121 SGFRLPYSLG TNYGSDGQLF NNCSPNSSGK STPGNTSVTS EVATPRPQA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSPNHIKRPM NAFMVWARDE RRKILKAYPD MHNSNISKIL GSRWKGMSNS EKQPYYEEQS  60
   61 RLSKLHMEQH PDYRYRPRPK RTCVIDGKKV RVNEYKTIMK TKKDLMWGDE PGFSQPSDLQ 120
  121 MDLASHVNLL NDLTQHHHQS HLLQTAE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.0
Match: 2gzkA
Description: No description for 2gzkA was found.

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