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View Structure Prediction Details

Protein: dpy-10
Organism: Caenorhabditis elegans
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dpy-10.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
352.0 [0..45] [371..1413]

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Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNNAKEDYR TFSLTTNYSR QMIYRCVTGL QIGFSLFSFI IVCVALPIMY NHVQNTITYV  60
   61 DREMAYCEVR FLYFYCIKFF STLQRSNDEA ALELQYGKMR MTGNRTARGA YGSGASHGFR 120
  121 PTAYGDEITG APLETECPGC CIPGPPGPRG SSGTPGKPGL PGNAGKPGMP GTTPNQTCPL 180
  181 NQVREPPPCR PCPKGPPGIK GWPGFPGDVG PPGPPGLKGI DGEDGAPGET GPTGPPGYRG 240
  241 GPGAPGDKGP TPEGDLKEGP PGDEGPPGPI GAPGMPGLPG RNGLTGGQGE RGWPGVSGES 300
  301 GEPGYPGPEG PMGGQGPPGE PGVCVCQNVD SILLINPGPQ PRIRADDYNS DDGYGGSRGG 360
  361 GDRAGYQGYG RK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 39.69897
Match: 1y0fA
Description: No description for 1y0fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle