| Protein: | hmit-1.3 |
| Organism: | Caenorhabditis elegans |
| Length: | 604 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hmit-1.3.
| Description | E-value | Query Range |
Subject Range |
|
|
310.0 | [0..17] | [604..11] |
|
Region A: Residues: [1-458] |
1 11 21 31 41 51
| | | | | |
1 MVQVAPVAAG AGSGQTRPSS DPKTGWFVYM LAFSAVIGGF LFGYDTGIVS AAMLYVPNAS 60
61 GIKPLDSVWQ EIIVSITPGV AAIGSLCSGP GSDFLGRKKI IIGASVTFTI GAIICAAAWT 120
121 KIILLIGRIL LGLAIGFASM IVPIYVSEAS PSHIRGKLVT GFQLMITVGL VIANIIGGAF 180
181 SYVDPDQVGW RLMFAFAAVP AIIQFVCFLF LPESPRWLYE HGRTVEAREV LTRIYNGHTE 240
241 WVDYEINEIS FSYEEELRAK AEHAGNGPTI IRILKTPHVR KAMIIGSLLQ MFQQLSGINT 300
301 VMYYTGNIIR SAGVKDNHTT IWISVGTSAI NFLGTFIPIA LVERVGRRVL LLVSMIGVIL 360
361 FLIAMGVSFL LINNDSLRTF DQQNYTLNYN PSVKHAAKCL KYSNCDFCVT DENCGFCESK 420
421 VAKKGYCLPF PSDDSSDYSA TGICEFSNLT NNGTDFEW
|
| Detection Method: |  |
| Confidence: | 17.39794 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 3.29248638217469 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 2.99050613058546 | bayes_pls_golite062009 |
| carbohydrate transmembrane transporter activity | 2.62141276633776 | bayes_pls_golite062009 |
| sugar transmembrane transporter activity | 2.47557586092261 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| solute:hydrogen symporter activity | 2.10485633822652 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| monosaccharide transmembrane transporter activity | 1.6904339767429 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.46605775041083 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
|
Region A: Residues: [459-604] |
1 11 21 31 41 51
| | | | | |
1 EDTYCHTKFT VLPIIIMVFY LLSFSAGYAP LPWVLNAEFY PLWARSTAVS VSTACNWIFN 60
61 LIVSLTFLSL SQAATKYGTF FIYCGCTMVA LVFVFFFVPE TKGYSIDEVE MLFMTKEERR 120
121 KAQKVLDESK EGKHRNSVAM SFDTKF
|
| Detection Method: | |
| Confidence: | 1.17 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
