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View Structure Prediction Details

Protein: CE33652
Organism: Caenorhabditis elegans
Length: 368 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33652.

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
169.0 [0..9] [363..186]

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Predicted Domain #1
Region A:
Residues: [1-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQRSFGSEI GNMTAATNSN DIADVSLATP LKSTEQMEKS ENGTAVSRLP KPLAIEVYSK  60
   61 VHNSNLSEDD LLDEIEDLID EKFFAGEKLM SSGKEYTVVS SEKRGGLTLY TMEDGTKIGH 120
  121 RDLRRKKGLS VEEIKKIAIE DAEFVDEKQW KVREELLAEN PIREIKKYAP IFSANRKSTP 180
  181 KTAQLSVAAE ADDSDVQEVS MDAESGAEAA NKSAMKTPRG APRASGGPVI LSSRRLQEKQ 240
  241 KEKDEKEKEK LEKKQKEQEE KKQKKEEEKA KKLKEKEEKL KEKEEKAARK AEKKEKNNGT 300
  301 MDKFLKKDTG SPSSKNAPLF SPSKWGEKRI AVGVKKMEDA WKRRDLEVKM QKIWKKNGAK 360
  361 MKTMFFFG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle