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View Structure Prediction Details

Protein: CE33651
Organism: Caenorhabditis elegans
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33651.

Description E-value Query
Range
Subject
Range
gi|76647955 - gi|76647955|ref|XP_584975.2| PREDICTED: similar to CDC42-binding protein kinase beta [Bos taurus]
170.0 [0..6] [331..622]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSENGTAV SRLPKPLAIE VYSKVHNSNL SEDDLLDEIE DLIDEKFFAG EKLMSSGKEY  60
   61 TVVSSEKRGG LTLYTMEDGT KIGHRDLRRK KGLSVEEIKK IAIEDAEFVD EKQWKVREEL 120
  121 LAENPIREIK KYAPIFSANR KSTPKTAQLS VAAEADDSDV QEVSMDAESG AEAANKSAMK 180
  181 TPRGAPRASG GPVILSSRRL QEKQKEKDEK EKEKLEKKQK EQEEKKQKKE EEKAKKLKEK 240
  241 EEKLKEKEEK AARKAEKKEK NNGTMDKFLK KDTGSPSSKN APLFSPSKWG EKRIAVGVKK 300
  301 MEDAWKRRDL EVKMQKIWKK NGAKMKTMFF FG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.221849
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle