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View Structure Prediction Details

Protein: lec-11
Organism: Caenorhabditis elegans
Length: 106 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lec-11.

Description E-value Query
Range
Subject
Range
gi|7500762 - gi|7500762|pir||T29894 hypothetical protein F38A5.3 - Caenorhabditis elegans
142.0 [0..1] [106..171]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVRGDLRVG KIHFENFKHH NGGGTEIGVM QMPVAPTPIV VAQPPPPMIV PQPQIVPVVQ  60
   61 QIMQPMVQPI YPSVQPIVYP TATPIIYTQP EVIYMDGYHH HRHHHY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle