| Protein: | dop-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 399 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dop-1.
| Description | E-value | Query Range |
Subject Range |
|
|
263.0 | [0..2] | [392..21] |
|
Region A: Residues: [1-399] |
1 11 21 31 41 51
| | | | | |
1 MNDLQWPLLG LFSVLIILAL FGNLLVCAAI LWDRSLRKQP ENLFLVSLAV SDLLVSVLVM 60
61 LFAAVNDILG YWPFGQFYCQ FWISFDITTC TASILNLCAI SLDRYWHISR PMVYIRYCNR 120
121 RRINYVIVLV WLISAGIGAA PLGFGFGSKV TINNLTGLPV CEMRLPLPYA IGSSMVSFFL 180
181 PAMVMVILYT KLYLYARKHV RSIKTQLQQA TSFLIMQLAS EKIREIRTSI FSKLNFLCPT 240
241 RFKNQRSPQD PHTPAAHNRS NISDQKARLT LGVIMGTFLV CWLPFFTVNI LRAWLPEIFS 300
301 SKTIMAVTWL GYANSSANPL IYSIFNRDFR RAFKKIIVRV FGCCWEEPDL NKSIYAAPDN 360
361 IERRRSCTRS SESAHDNNND ANATRLNLLS NNNEETIPE
|
| Detection Method: |  |
| Confidence: | 26.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
