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View Structure Prediction Details

Protein: ain-2
Organism: Caenorhabditis elegans
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ain-2.

Description E-value Query
Range
Subject
Range
ain-2 - status:Partially_confirmed UniProt:Q95R18 protein_id:AAL11096.1
553.0 [0..1] [395..228]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERCPSHLKK KALNEEALRR RLTSENPQIV AQAQQQAEEE ANAMMRIGRR PIVPSGWGDI  60
   61 PSEISTDKSE FDQSSSRGWD EGSISGGGSG RHPSHHQSND NSMWNSPSVG GGQSNSETRN 120
  121 PFFAQHMQQQ QHQQQHQPHY GGYGDNGVLD GGSLWSAAVM DGSSMVPPHP TMGVGSSASS 180
  181 SSI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [184-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PIGMLMMSGS GNVGGGPPSS SSLLDEDGSQ KKLAENLKLA VQKGHLDISL LSLPHIPPNV  60
   61 LDLLTEILAV IPRLDDYEDE LKKLGENRPS NYDEGASKEE KESWMSKDQK NDHDKAVIGV 120
  121 VTAKIEVTQL SKKITEALIE AGLLPPQPQT STSANTSTNH LNHRGGPPPG SDGGAGPSTS 180
  181 RSGGGGAAGG DSFNSSGGGG PPDHYYDYSF LG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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