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View Structure Prediction Details

Protein: sams-3
Organism: Caenorhabditis elegans
Length: 173 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sams-3.

Description E-value Query
Range
Subject
Range
gi|125832856, gi... - gi|41054081|ref|NP_956165.1| methionine adenosyltransferase I, alpha [Danio rerio], gi|28278852|gb|A...
285.0 [0..4] [171..11]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQHKFLFTS ESVSEGHPDK MCDQISDAVL DAHLAQDPHA KVACETVTKT GMIMLCGEIT  60
   61 SKAVVDYQVL VRNVIKKIGY DDSSKGMKNI ISFLHYWLIT LCQESHFLGL LIKYSIQFQD 120
  121 SITRHAMFLL HSNNNHLKSL LESTWTRIVT MSEPEIKELC LDMLLMKPKK RCH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.522879
Match: 2p02A
Description: No description for 2p02A was found.

Predicted functions:

Term Confidence Notes
catalytic activity 1.06105429247323 bayes_pls_golite062009
transferase activity 0.65719319539325 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 0.52044581139244 bayes_pls_golite062009
methionine adenosyltransferase activity 0.51131144272848 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle