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View Structure Prediction Details

Protein: CE33491
Organism: Caenorhabditis elegans
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33491.

Description E-value Query
Range
Subject
Range
gi|157750434 - gi|157750434|ref|XP_001678930.1| Hypothetical protein CBG11212 [Caenorhabditis briggsae AF16]
gi|187030541, gi... - gi|39590281|emb|CAE66019.1| Hypothetical protein CBG11212 [Caenorhabditis briggsae], gi|187030541|em...
357.0 [0..54] [246..185]

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Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVLSSDVWE YFCKKLSNDE QSNVEEQTEV YSMIEWIAQV EEMHSKPIYG NSVRSTVTDR  60
   61 DDKEVMIRIP LMTQVFEVVM KKSTGFPEEA PNFSGIFTEG FNSYEWNSQS TLWELAESVT 120
  121 DFLTTIDAAI LEIKEVDIDG FQIISLEIDE EENGHLLVRL KSFKYNETLT ISLNVEDFRG 180
  181 FPRFLRCSNP SRMASFDCEK WIAEDKLGTN LRRIYGELEA APLSEKQFDN KSKDSLEEVE 240
  241 EIMDFI

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Detection Method: MSA

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle