| Protein: | sra-30 |
| Organism: | Caenorhabditis elegans |
| Length: | 343 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-30.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..40] | [332..118] |
|
Region A: Residues: [1-343] |
1 11 21 31 41 51
| | | | | |
1 MYTNQTATEL ELFRCTSSGI LEAMNSIWIK INFFLSTSII LLTFFASIYA VRVLKFHNVY 60
61 SSGTQFLLFS LLISVNFNQM VYLVIQVRLQ IQIWKYSDDP CQIEFPSTEC YYDNSLYMFT 120
121 SYLVTWLVFS LTFDRNRIFF LKIFQSFFSC FNKLSLKYYT FQLIFTFIGH ILVYGGVSRA 180
181 GYVPTCQYPP QLALGAFQKM THLKIVFTIL NCVVILILLC FIVKRDRRIC HSIYDTNTRY 240
241 SSFENVLTTK SILVIAVTHL IFSCLSSVAV TIARAFEIGL SEYTFHTMTQ FIAGPLYGNL 300
301 SIPVLIYRKT SQCIEYRRKT IIKLTTQADE VDSRMMSLKK MWE
|
| Detection Method: |  |
| Confidence: | 47.154902 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
