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View Structure Prediction Details

Protein: CE33453
Organism: Caenorhabditis elegans
Length: 610 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33453.

Description E-value Query
Range
Subject
Range
CE33455 - status:Confirmed UniProt:Q86ND4 protein_id:AAO38595.1
847.0 [0..1] [492..1]

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Predicted Domain #1
Region A:
Residues: [1-182]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPASTQQNA INAFVENVLL NSNFYGLALD ILTHDNRTLV TAIPYPTTDK YNVQGYGSAR  60
   61 SVDEFRNQVI AFNGMIQPIS QSSSISDALL YVTTSLPAGG VKSSLIIVGN SAAMIDNIAP 120
  121 ILTNQLRSDF DIYTVGVGSG AVDLSPLSSG TGFSFTGDTQ QVADQIGLKM ASSSPSVYCP 180
  181 PP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [183-431]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTTVRPTVGP CQCTGRWVYN GDLAIAFENI KTNGSQSVAN FLSNTLLKNP DSYGLTNDVN  60
   61 GNQPSQLTLI PYPDSNTYPT YPYGWIRSVN DIGNYIDAIS PLPLATPDPR ISDALTFISA 120
  121 QPTTLNSKVV LLVGSNGTNV NAAMDSANQL KNAGYLVITV AQTTAASVFQ PLASGSQFAL 180
  181 HIGDGNDDAV AAQIASMLLD YSFTCFDDGS STPSPTTRCP GTQGTTQPGF STTTSLSPST 240
  241 SSSSPFNGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [432-610]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IATVFELNAV QPEIQNIIHF VRNNLYNSTN YDFATVSEAI NIPYAFTDNY NSNILQYGIA  60
   61 KSLIDLQSNV DTLYINAFSM RDATISDGLV WLINNYPYGI NTIIIVVGYH DDENPATTTF 120
  121 ILETLRAQGY KVITVAAGVG HGDLSGIADK PEWYFQVNDS NGQTIADAIS EVLCSLQFL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle