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View Structure Prediction Details

Protein: CE33434
Organism: Caenorhabditis elegans
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33434.

Description E-value Query
Range
Subject
Range
GCSP_LEPIC - Glycine dehydrogenase (decarboxylating) OS=Leptospira interrogans serogroup Icterohaemorrhagiae sero...
GCSP_LEPIC - Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae sero...
426.0 [0..2] [444..519]

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Predicted Domain #1
Region A:
Residues: [1-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALKFITII KPITWPTLSS IHPFAPVEQA KGYSRIFGDL EKWLCEITGY DNFSLQPNSG  60
   61 ANGEYAGLLA IRNYLIHKGE EQRNICLIPT SAHGTNPASA QMANMKVVVV DSDHHGNINY 120
  121 KDLAAKAEKY SNQLAAIMVT YPSTHGVFES SIRDVCDKVH EHGGQVYLDG ANMNAQVGLC 180
  181 RPGDYGSDVS HLNLHKTFCI PHGGGGPGVG PIGVKKHLAP FLPGHSVVPV DGRKVGSVAS 240
  241 APYGSASILA ITWAYIRMMG PVGLREASQV AILNANYMAK RLENDYRIVY KDEQGLVAHE 300
  301 FIMDCKPFKK HGIEVVDIAK RLMDYGFHSP TMSWPVHDCL MIEPTESEDK AEMDRLVEAL 360
  361 LSIREEIRQV ENGSLDKHLN PLKMAPHTLE KVTSDNWNMP YSRELAAFPK PWCTHKAWPT 420
  421 VGRVDDQYGD RNLVCTCPPI ESYQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.522879
Match: 1wytB
Description: Crystal structure of glycine decarboxylase (P-protein) of the glycine cleavage system, in apo form
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.76873005093488 bayes_pls_golite062009
transferase activity 0.3093369052482 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle