| Protein: | CE33431 |
| Organism: | Caenorhabditis elegans |
| Length: | 387 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33431.
| Description | E-value | Query Range |
Subject Range |
|
|
503.0 | [0..1] | [387..105] |
|
Region A: Residues: [1-204] |
1 11 21 31 41 51
| | | | | |
1 MSLGGPAHEM LMSQLGGRQG NTVDCSPGEG DKVCLLVDQT RFLVSQRLLT SKPDTMLGRM 60
61 FSMRASCGDL GADLVSPNER DEFEVADGMT SSCFRAILDY YQSGTMRCPS SVSVSELREA 120
121 CDYLLVPFNA QTVKCQNLHA LLHELSNEGA REQFSQFLEE IILPQLVAST EHGERECHLV 180
181 VLLDDDVVDW DDEYPPQMGE ETTH
|
| Detection Method: |  |
| Confidence: | 33.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [205-387] |
1 11 21 31 41 51
| | | | | |
1 VVYSTHLYKF FKYAENRDCA KQVLKERGLK KIRLGMEGYP THKEKIKKRF NKAEVIYNYV 60
61 QRPFVHCSWE KEEARSRHVD FACPIVKSKS NPSLAAAASD PLPQPAPLQQ QHRVAVFGEA 120
121 APLAAHNRVD DQHFVQPLNQ LMQQQAQLPQ NNAMLGVNVQ QQQHNHPLHS PPVNFQRNDR 180
181 EEE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
