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View Structure Prediction Details

Protein: cwn-1
Organism: Caenorhabditis elegans
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cwn-1.

Description E-value Query
Range
Subject
Range
gi|114642843 - gi|114642843|ref|XP_522589.2| PREDICTED: similar to Wnt-5b [Pan troglodytes]
379.0 [0..17] [331..518]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKSTQVILI FILLISIVES LSWLALGLAA NRFDRDKPGT SCKSLKGLTR RQMRFCKKNI  60
   61 DLMESVRSGS LAAHAECQFQ FHKRRWNCTL IDPVTHEVIP DVFLYENTRE SAFVHAISSA 120
  121 AVAYKVTRDC ARGISERCGC DYSKNDHSGK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [151-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SQFQYQGCSD NVKFGIGVSK EFVDSAQRRV LMMKDDNGTS LLGPSQLSAD GMHMINLHNN  60
   61 QAGRQVLEKS LRRECKCHGM SGSCEMRTCW DSLPNFRHIG MAIKDKFDGA AEVKVVKEDG 120
  121 IEKPRIVMKN SQFKRHTNAD LVYMTPSPDF CESDPLRGIL GTKGRQCTLA PNAIDDCSLV 180
  181 KF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.303 0.022 extracellular matrix structural constituent d.110.1 Profilin (actin-binding protein)


YRC Informatics Platform - Version 3.0
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