| Protein: | sra-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 334 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-11.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..5] | [313..353] |
|
Region A: Residues: [1-334] |
1 11 21 31 41 51
| | | | | |
1 MTTNNPVCAS DAHMEMYSSK LYTSALFLNL IIATTSMILT GFAIQKLFME SIINISTRMF 60
61 LFCGLMCCSL HQTAYIVLRI QVIYQVFFKL SEPCNLYYPA IDCKYVTFSL VAGNTGMIFI 120
121 QSAMTIDRIF ATIFPKLWPK LKYWPGVVLS ILMIACNYAN VQIIFWGDPL TEYVPTCGQF 180
181 PSKSVNRFQT FLAIALYMSI AHMVINVIIL YINVLQDRQQ SKSFNVNQRY QSREALKSSQ 240
241 AIFFLSMSQF FACLIYSVFT KVFLEFQLNL SPLQSGLVLA LSYTTPYACI AIPSLIIFTF 300
301 RFIKNQRLRN INELRSQTET GDECMRKIAK IWEK
|
| Detection Method: |  |
| Confidence: | 46.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
