| Protein: | sra-22 |
| Organism: | Caenorhabditis elegans |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-22.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..11] | [333..353] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MNKTAEDLLD SLKCASKDLS SALTSVTIKF NCIFISTIVL ISYCFILLAI QALLRHNIFS 60
61 NSTRLILIVC LLNSVVHQTT MMETRVRQIY RSFLFASDPC KLLYRSSDCV VDLYFFFLTG 120
121 YFSTYSVFSL TSDRLVSHYK SKFYHTHQYF IAISLLVIQL LLTLVSFYIA FYGVSLAGYV 180
181 SVCIQYPKAA VQYGTINTVR TMVMVCCLIV TGFTYYLSVK SEKQIQKISY SPGERYSAYE 240
241 NITTSQSVCI FIILQLSCVM LTSIGMNLLL MMGEAMSEGT FTTIALFLPG ITYANLCLPL 300
301 VIYFKTKLTI RNRKFRIAVM TSMYGDAGEH IARLKKSWE
|
| Detection Method: |  |
| Confidence: | 46.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
