| Protein: | sra-17 |
| Organism: | Caenorhabditis elegans |
| Length: | 337 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-17.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..16] | [327..27] |
|
Region A: Residues: [1-337] |
1 11 21 31 41 51
| | | | | |
1 MNQTELLESL KCASEGMVKA MTSTTMKLNF VFIATVIFLS FYFAGLAIQA LLRNNIFSNS 60
61 TRHILIVCLL NSIVHQAVTL ETRIHQVYRS FVYSSEPCRL LFHFTECEVE LYFYYLTNYF 120
121 STYAVFSLTF DRLVSHYKPK YYFSHQYYVS NSLLIIQLLL SLSTYYVGLY GVPLVGYAPI 180
181 CYYTPRLAVN FSKINDFRTA TMVFCIIVTI FIYYLSVKSE KQIHRTSYSP GERYIACENV 240
241 ATSQSVCILI VLQFACIMLS SFGVNYIRAR ESLMSEENFN KIAPFFPGVT YASLCLPLVI 300
301 YFKTKLTIRN RKLRIGVMTS MYGDVGDHMN RLKKSWE
|
| Detection Method: |  |
| Confidence: | 50.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
