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View Structure Prediction Details

Protein: faah-1
Organism: Caenorhabditis elegans
Length: 507 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for faah-1.

Description E-value Query
Range
Subject
Range
GATA_GEOKA - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus kaustophilus (strain HTA426) GN=gatA PE...
GATA_GEOKA - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Geobacillus kaustophilus GN=gatA PE=3 SV=1
419.0 [0..62] [504..2]

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Predicted Domain #1
Region A:
Residues: [1-507]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFYLVLLVL GAIAFYVHFS NNRKKLIERL EIVAQRRRDD LSKNVEQARK AADKLDTQRR  60
   61 DWIGSLDFEQ LRDELQRGHV TCVEAIRAYF HKAILAHEKT NAVTCFILDA ERQAEELDEQ 120
  121 AKLPYYVKPP LFGVPLSLKE CLKVKGYDTT RGFVQDAYHP ATEDSIQVEH YKKLGIPCHF 180
  181 TGTAGIKPSK MRFAHRGGGA SVPGKPLIDA NDGPMAKDVK TNVEFLRNVW GDIDFQSDRD 240
  241 PYCPPVHWNE SVYSSEKKLR VGYYIDDGWF TPTPALQRAV LESKKHLEAA GHTVIPFYPP 300
  301 RLPSVMQLYF RAVCLDGGQY VLNKLLKDII EPTIRFQVTL WMVPVWIQRI LSYPVSLVFP 360
  361 RMGMLMQSLT RDTFELREAY ADIEAYREEF VGLMMKDNLD VILCPASIMP APQHDIPSKV 420
  421 VSGVSYTCLY NLLDFGAGVV PVTAVSKSDE EKLINEYPET DKWYQITKKA TLGAVGMPIG 480
  481 VQVAAPPYRE EAVLRTMREI EIAVTGK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.522879
Match: 1mt5A
Description: Fatty acid amide hydrolase (oleamide hydrolase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.376451190881523 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle