| Protein: | nuo-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 634 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nuo-5.
| Description | E-value | Query Range |
Subject Range |
|
|
533.0 | [0..32] | [630..4] |
|
Region A: Residues: [1-634] |
1 11 21 31 41 51
| | | | | |
1 MHRVGGQIVR GVSKAQQKRS LSVAAPAPPK KVEVFIDDKK VLVDPGMTIL QACALVGVDI 60
61 PRFCYHDRLS IAGNCRMCLV EVEKSVKPVA SCAMPVMNGM KVKTNSDFVK KAREGVMEFM 120
121 LNNHPLDCPI CDQGGECDLQ DQAMNFGSDR GRLQSRFDGK RALEDKNIGP LVKTVMTRCI 180
181 QCTRCVRFAN EVAAFPDFGT TGRGQDLQIG TYVEKFFASE LSGNIIDICP VGALTSKQYA 240
241 FTARPWETRK TESVDVMDAT GSNIVLSHRT GELLRVIPKI NDDINEEWIG DQSRFAVDGL 300
301 KVQRLLTPMI RGADGQLKPA TWEEALFTVA AKLRETPAEQ KAAVAGGLND VESLVALKDL 360
361 FNRFNSENVM TEEEFPDVGS GGSDLRSNYV FNDGIASVEN ADAILLVGTN PRFEAPTLNA 420
421 RIRKSFLYSD VQVGVIGAET ELTYEYDYLG ASAKAIDEIL AGKGDFAKIL SSATTPLIIV 480
481 GAQALKGEAG AALLGKLQQL ADKLGSGKEV KVLNVLQRWA GQAGALDVGY KAGTAGIRKT 540
541 PIKFLYLLGA DEGKVTKANL DPSAFVVYQG HHGDAGAEMA DVVLPGAAYT EKEGTYVNTE 600
601 GRSQRCASGK AKKKLDLSIF WQRKSNNFGF FQRK
|
| Detection Method: |  |
| Confidence: | 96.0 |
| Match: | 2fug3 |
| Description: | Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxidoreductase activity | 3.42905611129045 | bayes_pls_golite062009 |
| electron carrier activity | 2.29892126091131 | bayes_pls_golite062009 |
| succinate dehydrogenase activity | 2.17392875467497 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 2.00026555763397 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-CH group of donors | 1.9389275936249 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor | 1.87673954208357 | bayes_pls_golite062009 |
| formate dehydrogenase activity | 1.34526518541816 | bayes_pls_golite062009 |
| NADH dehydrogenase (ubiquinone) activity | 1.22033162240751 | bayes_pls_golite062009 |
| NADH dehydrogenase activity | 1.11412439147941 | bayes_pls_golite062009 |
| binding | 0.689656573625534 | bayes_pls_golite062009 |
| 4 iron, 4 sulfur cluster binding | 0.628123949302495 | bayes_pls_golite062009 |
| iron-sulfur cluster binding | 0.5629744057246 | bayes_pls_golite062009 |
| metal cluster binding | 0.5629744057246 | bayes_pls_golite062009 |
| oxidoreduction-driven active transmembrane transporter activity | 0.300439488774121 | bayes_pls_golite062009 |
| catalytic activity | 0.105119876745552 | bayes_pls_golite062009 |
| NADH dehydrogenase (quinone) activity | 0.0921104166364124 | bayes_pls_golite062009 |
