YRC Public Data Repository - Protein Structure Prediction

Protein:	CE33294
Organism:	Caenorhabditis elegans
Length:	240 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33294.

Description	E-value	Query Range	Subject Range
gi\|67850867, gi\|... - gi\|67874931\|ref\|ZP_00504482.1\| Cysteine synthase K/M:Cysteine synthase K [Clostridium thermocellum A... gi\|196252125, gi... - gi\|196252125\|ref\|ZP_03150787.1\| cysteine synthase A [Clostridium thermocellum DSM 4150], gi\|19619839...	270.0	[0..1]	[214..97]

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Predicted Domain #1

Region A:
Residues: [1-240]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPATMSVERR AMLRAYGAEV ILSDPAEGHP GVIKKVEMLV DKLPNAHCLD QFSNPANPAA  60
   61 HYRTTGPEIW RQTEGKVDIV CFGVGSSGTV TGVGRYLREQ NPNIEIYPVE PYESSVLSGL 120
  121 PRGPHKIQGI GAGIVPGNVD RSLFTEILRI KSDDAMQMAR RLADEEAILG GISSGANVVA 180
  181 AVELASRPEN KGKLIVTTVN SFAERYFTTE LYSDVLNEVS QLTFSSDDEA MGIAKKYLGL 240
  241

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Detection Method:	PSI-BLAST
Confidence:	62.39794
Match:	2q3bA
Description:	No description for 2q3bA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits