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View Structure Prediction Details

Protein: CE33287
Organism: Caenorhabditis elegans
Length: 425 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33287.

Description E-value Query
Range
Subject
Range
CE00235 - F-box domain. status:Partially_confirmed UniProt:P34483 protein_id:CAA77589.1
293.0 [0..2] [424..7]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFNLLDLPI VPRQKALKYL EPIDLFELSL CSKRMAQSVR DLKIEASAHF ITLTRGQSSV  60
   61 HVQFKERSRA IWWDFKEIFM KKDLKDKRKI GYILFENCEK FRRGAFTLDE FYCHFDNLEE 120
  121 GAAAVSKHFQ FLFP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-339]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPLNILLSPT VYRHLEFLFF EPSIQKCESF EMCGADIPAK RTMNRIFDKL TIEKKLCIRP  60
   61 KTSENYVIKQ ALRVEELFLR SARWMTREHL LELNCIVADL SDHNFQCSDF EAFAEKWMNN 120
  121 KSSKVENLRF QWQSDVEFKL ENLKTSRWDS TRRERNYIFT MKNESVQIDC SDGFELERND 180
  181 GRLATFVVEQ QEDRTHILYF LVWIE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [340-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFPEKKRLEN LPKTLGPLYK QLEKINRDYP DESSLERLLS NPNLVYTEFL ETYKVLKNMD  60
   61 GENRSPSTGQ AFRRTIFDKI YNTIDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle