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View Structure Prediction Details

Protein: CE33231
Organism: Caenorhabditis elegans
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33231.

Description E-value Query
Range
Subject
Range
unc-34 - status:Confirmed UniProt:Q8IAA0 protein_id:AAO12397.2
266.0 [0..1] [454..15]

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Predicted Domain #1
Region A:
Residues: [1-99]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYNESTKGW VLLGGNDDSM TNVRLIQDIR RPEFRIVSNR ADSTNILNCN IYRGIKYHKA  60
   61 TPMFHQWRTE QRRVYGLNFE NEQDATMFLS IVLQAIETL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.0
Match: 2iybA
Description: No description for 2iybA was found.

Predicted functions:

Term Confidence Notes
binding 1.80330385662185 bayes_pls_golite062009
protein binding 1.42613583294271 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [100-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVHDMNGISD YQQMHQVDNV YQDPHQHLMH IHSAPNFHDE NQNAANFRKT SQHASSLLSS  60
   61 TAAALTQQQR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [170-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RASQSSSTSA GSSIPHAPPP PVPLTSNIPQ APPAPPPPIG GIAPVNAHGA PPPPPLPPVG  60
   61 AGAPPPPPPP PPPAQLMASS GTPSLAEQLK MRSQQGLKAT SNGVKAAAAE PEKPAAKGAG 120
  121 NLMSELEAQL NKRKMTQAKS DAVDSKSNTS NGSSDSGCGT ATSTNGCGSS NGGSVGSAAA 180
  181 KKWSVS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [356-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DATKPMDSPK THRKLPSASS LFSQEDSSSS SSSTLTPSKP TTNGTSSAIP NDLLERLRAD  60
   61 IMVEMRLEMN KLEQRIVEAN DRAVDRAVET ILNAIGGRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle