YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: inx-19
Organism: Caenorhabditis elegans
Length: 438 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for inx-19.

Description E-value Query
Range
Subject
Range
inx-19 - status:Confirmed UniProt:O61715 protein_id:AAM45360.1
462.0 [0..1] [438..17]

Back

Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFHATLARS FINALSVRGD DDAVDRLNYY YTPLILAVCC LVISAKQYGG TPIECWVNPH  60
   61 SRESMEEYIE SYCWIQNTYW IPMYENVPDD HTAREEKQIG YYQWVPFILI AEALMFSLPC 120
  121 IFWRLC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SFQSGLNIQT LINAACDGQA LLDASDRQKA VEAITTNFVD NLDLQSPNGR IRARGWIARI  60
   61 KFSRFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [193-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGQCLSILHS FTKLLYSMNV VAQFLILNAC LKSSDFLFFG FQVLNDIWAG RPWTETGHFP  60
   61 RVTLCDFEVR YLANLNRYTV QCALLINIIN EKVFAFLWCW YMILAIITTC SFIYWIANSF 120
  121 IHSEKVDYVM KFIQIAESSE FKKLQKFEKD ATVE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [347-438]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RLYTVIAFAP HLLDTFVSDF LKSDGVLMLR MISNHAGDMI VVQLVRNLWQ EFRERNWREF  60
   61 EEHEEMKDVE MRRIHGGERI VISNPGQTKS FL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle