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View Structure Prediction Details

Protein: nuo-2
Organism: Caenorhabditis elegans
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nuo-2.

Description E-value Query
Range
Subject
Range
gi|157747591 - gi|157747591|ref|XP_001668890.1| Hypothetical protein CBG12670 [Caenorhabditis briggsae AF16]
gi|187029272, gi... - gi|39595728|emb|CAE67231.1| Hypothetical protein CBG12670 [Caenorhabditis briggsae], gi|187029272|em...
302.0 [0..1] [267..135]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGSVIRQAV SRQIVRNSPI STTAAVAQTN QTGDKKESPK KPTIWKIDEH KRERLANFGK  60
   61 YAAECLPKFV QKVQFAAGDE LELLIHPSGV VPVLSFLKGN HSAQFTNLTF ITGMDVPTRK 120
  121 NRLEVIYSLY SVRFNARVRV RTYTDEIAPI DSATPVFKGA DWFEREVYDM YGVWFNNHPD 180
  181 LRRILTDYGF EGHPFRKDYP LSGYNEVRYD PELKRVVYEP SELAQEFRKF DLNTPWETFP 240
  241 AFRNQSITSG YETILEVAEP TPATPQNK

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Detection Method: PSI-BLAST
Confidence: 30.0
Match: 2fug5
Description: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle