Protein: | srh-16 |
Organism: | Caenorhabditis elegans |
Length: | 333 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srh-16.
Description | E-value | Query Range |
Subject Range |
|
160.0 | [0..2] | [330..226] |
Region A: Residues: [1-333] |
1 11 21 31 41 51 | | | | | | 1 MQEMHCQTPP ISVYKTLMHT LHILDVPLYL IVIIALFKIK SNIFQTYKYY LIWHTIINVL 60 61 TEFHSCFLML PVVHLPYPLL RATGILAEFG FSGLFLFYVL SAFIIQTSFS IIEMFYFRYK 120 121 ASVFDYQSRN FTKFVKLFIY SFRVLTILFP GITFGTFFYS IERQEEYKKE LAMIDPSIPE 180 181 VTCYSSVLAA PFSDSVMIST MITWLACIIC AFSVIPSTTI YLNSHLRSTK NMSPGVVRMQ 240 241 KMLLSSLIVQ TFVHGFMLGI PNILFVYTIF FGAHLEVAAY AAFMCLTFHG FLSTIAMIMY 300 301 TKPIHIAILE TFQRFCSSLK NIIGCLKPQN QFH |
Detection Method: | |
Confidence: | 29.30103 |
Match: | 1f88A |
Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |