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View Structure Prediction Details

Protein: CE33097
Organism: Caenorhabditis elegans
Length: 181 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33097.

Description E-value Query
Range
Subject
Range
gi|38014570 - gi|38014570|gb|AAH60587.1| Ldha protein [Rattus norvegicus]
193.0 [0..3] [171..102]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLDHNRAL AQLALKTGTT IGNVKNVIIW GNHSGTQFPD VTHATVNKNG TETDAYAAVG  60
   61 DNAFLQGPFI ATVQKRGGVI IEKRKLSSAM SAAKAACDHI HDWHFGTKAG QFVSMAVPSD 120
  121 GSYGIPQGLI FSFPVTIEGG EWKIVQGLSF DDFAKGKIAA TTKELEEERD DALKACDDAN 180
  181 I

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Detection Method: PSI-BLAST
Confidence: 47.221849
Match: 4mdhA
Description: Malate dehydrogenase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.14023531388481 bayes_pls_golite062009
oxidoreductase activity 0.35135191441759 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.289188075300681 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle