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View Structure Prediction Details

Protein: CE33040
Organism: Caenorhabditis elegans
Length: 502 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33040.

Description E-value Query
Range
Subject
Range
gi|7497732 - gi|7497732|pir||T32780 hypothetical protein C50D2.7 - Caenorhabditis elegans
615.0 [0..1] [496..1]

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Predicted Domain #1
Region A:
Residues: [1-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSETFVPSI FSYKHRLLHL SVLFFIVPYW YSYYNDQHRL SSYSVETAMF LSWERAIVKP  60
   61 GAMFKKAVIG FNCNVDLIVS GVRVVDALNT TCSEGKDQET LETLADLHQT FAHFFQRGAA 120
  121 AERYMSSEDQ FNLLVAESEA STRSHHHIGG NAALMADRIA ANFPSTEVYL VGPIGPRSQA 180
  181 LLHPSVKRTN STRILKDELH VILEYKQGEI LGDWVAPSSS RFITSHDHFS GSMVVMEMFF 240
  241 KAIAQFRPDL VVITGVHLLE FQSKEMRQEK MRLIKRNLLQ IPPKVPIHLE LGSLADEIFS 300
  301 TDVINKILPY VDSLGINEQE LTFLSHIANG PHMEEYPVQA GTVHVHKVVE MLHWLLKTYG 360
  361 RDPTGQIASK TGYRLSRIHF HCLTYHIMVS SGTDWSNLAA GLAAGARIAG RLSCNIGANT 420
  421 MDSELLEIRT PANFVLDKKI EKNYQFEAHN PIASWMREDV LFVFTPVLVC RLPSKTVGID 480
  481 DAISATGLLY SQFYRLNRPT HW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 107.0
Match: 1u2xA
Description: Crystal Structure of a Hypothetical ADP-dependent Phosphofructokinase from Pyrococcus horikoshii OT3
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle