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View Structure Prediction Details

Protein: stc-1
Organism: Caenorhabditis elegans
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for stc-1.

Description E-value Query
Range
Subject
Range
gi|59803500 - gi|59803500|gb|AAX07834.1| HSP70 [Acanthopagrus schlegelii]
498.0 [0..28] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGATGSLLA GGIFILLLAG WLGQKYGLPP PPPKIAGIDL GTTYSSIGIY HAVTGETIIL  60
   61 PDDLGKKSVP SVVAFLPNGT VLIGTRATEQ QEHNPKRTIY DAKRFIGRNF EKNNKDFLSD 120
  121 QKRYPFKINL DSEGKAFFEI PLDSGTKNVY PEEIGSLIIG YLKSAAAKHL GVTLGQVVIS 180
  181 CPAEFNEKQR NFTAKAAEIA EMEVRRVISE PTAAALAYGL HKKQGVENVV VVDLGGGTLD 240
  241 VSVLWLQGGV FVTQAMAGNN RLGGQDFNDR VQKHLISKIA EKFGKTIDNK EDIQQIRMEV 300
  301 EKGKIRLTNV PSTTISLNLK TVGKWNYELT RDEFETLNGD LLKAIELPIT AALADANLDT 360
  361 ADVDEIVLVG GSTQVPAVRK IVGRFFKKSA NYGVDPELAV VTGASVQAGV IGGGWPLQVA 420
  421 AMELPAKRRK RHFFTEEQKE NEKDRTISEL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 138.0
Match: 1yuwA
Description: crystal structure of bovine hsc70(aa1-554)E213A/D214A mutant
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.04189938140745 bayes_pls_golite062009
protein binding 0.979596124775086 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle