| Protein: | gar-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 334 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gar-2.
| Description | E-value | Query Range |
Subject Range |
|
|
272.0 | [0..1] | [331..501] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MDFTKDNEIV RPPTPPDDNT YSNPNFSMIS EQLTNGFSRQ EPSSVIERES TAPCVSPEPS 60
61 HASLENEFNE NHHAHFKPEL SLPFIDADSV SSMVGHDDLR RAMSIRISRS VSMQGTARAT 120
121 PVIEIVENLE EALKICENLE ELREDENKNE EEKQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [155-334] |
1 11 21 31 41 51
| | | | | |
1 KNGLENGGMN HVIIANDEQQ PSTSKESEQK EEMTPENHDP NEVKVPLIAV SRVESVKSTA 60
61 GGKVRRLITQ MRSHSIRSKR KANKNKEYKS RSENRARKAL RTITFILGSF IILWTPFYVL 120
121 ATIYGFCETC KASPSFNTLY TISYYLCYMN SPLNPFCYAM ANQQFKKTLT RIFKGDFRRV 180
181
|
| Detection Method: | |
| Confidence: | 25.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
