| Protein: | acr-16 |
| Organism: | Caenorhabditis elegans |
| Length: | 480 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-16.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..13] | [478..95] |
|
Region A: Residues: [1-325] |
1 11 21 31 41 51
| | | | | |
1 MSVCTLLISC AILAAPTLGS LQERRLYEDL MRNYNNLERP VANHSEPVTV HLKVALQQII 60
61 DVDEKNQVVY VNAWLDYTWN DYNLVWDKAE YGNITDVRFP AGKIWKPDVL LYNSVDTNFD 120
121 STYQTNMIVY STGLVHWVPP GIFKISCKID IQWFPFDEQK CFFKFGSWTY DGYKLDLQPA 180
181 TGGFDISEYI SNGEWALPLT TVERNEKFYD CCPEPYPDVH FYLHMRRRTL YYGFNLIMPC 240
241 ILTTLMTLLG FTLPPDAGEK ITLQITVLLS ICFFLSIVSE MSPPTSEAVP LLGIFFTCCM 300
301 IVVTASTVFT VYVLNLHYRT PETHD
|
| Detection Method: |  |
| Confidence: | 78.522879 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [326-480] |
1 11 21 31 41 51
| | | | | |
1 MGPWTRNLLL YWIPWILRMK RPGHNLTYAS LPSLFSTKPN RHSESLIRNI KDNEHSLSRA 60
61 NSFDADCRLN QYIMTQSVSN GLTSLGSIPS TMISSNGTTT DVSQQATLLI LHRIYHELKI 120
121 VTKRMIEGDK EEQACNNWKF AAMVRTYISR KIENF
|
| Detection Method: | |
| Confidence: | 37.69897 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
